TFAM

TFAM
Available structures PDB Ortholog search: PDBe RCSB List of PDB id codes 3FGH, 3TMM, 3TQ6, 4NNU, 4NOD
Identifiers
Aliases	TFAM, MTTF1, MTTFA, TCF6, TCF6L1, TCF6L2, TCF6L3, transcription factor A, mitochondrial, MTDPS15
External IDs	OMIM: 600438; MGI: 107810; HomoloGene: 31139; GeneCards: TFAM; OMA:TFAM - orthologs
Gene location (Human) Chr. Chromosome 10 (human)[1] Band 10q21.1 Start 58,385,345 bp[1] End 58,399,220 bp[1]
Gene location (Mouse) Chr. Chromosome 10 (mouse)[2] Band 10 B5.3|10 36.83 cM Start 71,061,294 bp[2] End 71,074,110 bp[2]
RNA expression pattern Bgee Human Mouse (ortholog) Top expressed in right testis left testis secondary oocyte Achilles tendon ventricular zone monocyte germinal epithelium ganglionic eminence mucosa of sigmoid colon gonad Top expressed in ventricular zone endocardial cushion atrioventricular valve abdominal wall embryo somite migratory enteric neural crest cell epiblast muscle of thigh triceps brachii muscle More reference expression data BioGPS More reference expression data
Gene ontology Molecular function DNA binding mitochondrial promoter sequence-specific DNA binding heat shock protein binding DNA-binding transcription factor activity DNA-binding transcription activator activity, RNA polymerase II-specific chromatin binding RNA polymerase II cis-regulatory region sequence-specific DNA binding protein binding transcription coactivator binding DNA binding, bending RNA binding sequence-specific DNA binding Cellular component cytosol mitochondrial matrix mitochondrion mitochondrial nucleoid nucleus protein-containing complex Biological process DNA-dependent DNA replication regulation of transcription, DNA-templated regulation of transcription by RNA polymerase I transcription initiation from mitochondrial promoter mitochondrion organization transcription, DNA-templated positive regulation of transcription, DNA-templated mitochondrial respiratory chain complex assembly positive regulation of transcription by RNA polymerase II transcription by RNA polymerase II mitochondrial transcription Sources:Amigo / QuickGO
Orthologs Species Human Mouse Entrez 7019 21780 Ensembl ENSG00000108064 ENSMUSG00000003923 UniProt Q00059 P40630 RefSeq (mRNA) NM_001270782 NM_003201 NM_012251 NM_009360 RefSeq (protein) NP_001257711 NP_003192 NP_033386 Location (UCSC) Chr 10: 58.39 – 58.4 Mb Chr 10: 71.06 – 71.07 Mb PubMed search [3] [4]
Wikidata
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Mitochondrial transcription factor A, abbreviated as TFAM or mtTFA, is a protein that in humans is encoded by the TFAM gene.^[5][6]

Function

This gene encodes a mitochondrial transcription factor that is a key activator of mitochondrial transcription and participates in mitochondrial genome replication. TFAM binds mitochondrial promoter DNA to aid transcription of the mitochondrial genome. Studies in mice have demonstrated that this gene product is required to regulate the mitochondrial genome copy number and is essential for embryonic development. A mouse model for Kearns–Sayre syndrome was produced when expression of this gene was eliminated by targeted disruption in heart and muscle cells.^[6]

TFAM is a double box High-mobility group DNA-binding and bending protein.^[7] This bending action is important for mitochondrial transcription initiation in mammals, but not in yeasts with the homolog Abf2. TFAM may also participate in the packaging of the mitochondrial genome, as its binding activity is non-sequence-specific. ^[8]

Interactions

TFAM has been shown to interact with TFB1M and^[9] TFB2M.^[10]

References

Further reading

External links

• Overview of all the structural information available in the PDB for UniProt: Q00059 (Transcription factor A, mitochondrial) at the PDBe-KB.